STRINGSTRING
XP_008439334.1 protein (Cucumis melo) - STRING interaction network
"XP_008439334.1" - Telomere length regulation protein TEL2 homolog in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439334.1Telomere length regulation protein TEL2 homolog (1010 aa)    
Predicted Functional Partners:
XP_008464193.1
TELO2-interacting protein 1 homolog (221 aa)
     
 
  0.937
XP_008447112.1
Uncharacterized protein LOC103489639 isoform X1 (1356 aa)
     
 
  0.937
XP_008453348.1
RNA polymerase II-associated protein 3 isoform X1 (524 aa)
       
 
  0.926
XP_008465894.1
LOW QUALITY PROTEIN- DNA repair endonuclease UVH1; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1020 aa)
       
 
  0.922
XP_008440815.1
Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family (3890 aa)
     
 
  0.913
XP_008453086.1
Serine/threonine-protein kinase ATM isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (3009 aa)
       
 
  0.910
XP_008438434.1
Serine/threonine-protein kinase ATM-like isoform X1 (597 aa)
       
 
  0.910
XP_008447915.1
Serine/threonine-protein kinase ATR; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (2721 aa)
     
 
  0.903
XP_008441145.1
Fanconi anemia group M protein isoform X1 (1329 aa)
       
 
  0.889
XP_008440418.1
ruvB-like 2; Belongs to the RuvB family (465 aa)
     
 
  0.842
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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