STRINGSTRING
XP_008439356.1 protein (Cucumis melo) - STRING interaction network
"XP_008439356.1" - Protein NRT1/ PTR FAMILY 7.3-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439356.1Protein NRT1/ PTR FAMILY 7.3-like (549 aa)    
Predicted Functional Partners:
XP_008467040.1
High affinity nitrate transporter 2.4-like (446 aa)
           
  0.566
XP_008446183.1
High affinity nitrate transporter 2.5 (505 aa)
           
  0.543
XP_008461360.1
Carboxypeptidase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns; Belongs to the peptidase S10 family (483 aa)
           
  0.536
XP_008454858.1
Serine carboxypeptidase-like 50; Belongs to the peptidase S10 family (467 aa)
           
  0.536
XP_008444756.1
LOW QUALITY PROTEIN- tyrosine/DOPA decarboxylase 2-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (499 aa)
           
  0.536
XP_008465793.1
Auxin transporter-like protein 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (466 aa)
     
   
  0.421
XP_008461353.1
Serine carboxypeptidase-like 40; Belongs to the peptidase S10 family (517 aa)
           
  0.418
XP_008458826.1
Golgin candidate 6; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (911 aa)
           
  0.418
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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