STRINGSTRING
XP_008439367.1 protein (Cucumis melo) - STRING interaction network
"XP_008439367.1" - Uncharacterized aarF domain-containing protein kinase 1-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439367.1Uncharacterized aarF domain-containing protein kinase 1-like (481 aa)    
Predicted Functional Partners:
XP_008464584.1
COBRA-like protein 4 (433 aa)
           
  0.578
XP_008453301.1
COBRA-like protein 4 (456 aa)
           
  0.578
XP_008464152.1
Uncharacterized protein sll1770; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (707 aa)
   
     
0.428
XP_008464364.1
Magnesium protoporphyrin IX methyltransferase, chloroplastic (316 aa)
     
 
  0.402
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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