STRINGSTRING
XP_008439368.1 protein (Cucumis melo) - STRING interaction network
"XP_008439368.1" - Conglutin beta 5 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439368.1Conglutin beta 5; Vicilin (735 aa)    
Predicted Functional Partners:
m2
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG (By similarity) (131 aa)
           
  0.652
XP_008438322.1
DNA repair protein RAD50 (1316 aa)
           
  0.567
XP_008460572.1
Structural maintenance of chromosomes protein; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (1245 aa)
           
  0.566
XP_008447563.1
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (131 aa)
           
  0.483
XP_008447662.1
13S globulin seed storage protein 2-like (465 aa)
           
  0.483
XP_008447427.1
11S globulin seed storage protein 2-like; Seed storage protein (478 aa)
           
  0.483
XP_008448895.1
hsp70-Hsp90 organizing protein 3-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (577 aa)
           
  0.468
XP_008446389.1
Mitochondrial uncoupling protein 3; Belongs to the mitochondrial carrier (TC 2.A.29) family (300 aa)
           
  0.461
XP_008455845.1
Isocitrate lyase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns; Belongs to the isocitrate lyase/PEP mutase superfamily. Isocitrate lyase family (576 aa)
     
   
  0.444
XP_008438984.1
1-Cys peroxiredoxin (219 aa)
     
   
  0.438
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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