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XP_008439389.1 protein (Cucumis melo) - STRING interaction network
"XP_008439389.1" - DExH-box ATP-dependent RNA helicase DExH12-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439389.1DExH-box ATP-dependent RNA helicase DExH12-like; Putative U5 small nuclear ribonucleoprotein 200 kDa helicase (1356 aa)    
Predicted Functional Partners:
XP_008461126.1
pre-mRNA-processing-splicing factor 8-like (2347 aa)
     
 
  0.993
XP_008462876.1
Splicing factor 3B subunit 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (1262 aa)
     
 
  0.992
XP_008439899.1
pre-mRNA-splicing factor SYF1 (913 aa)
     
 
  0.991
XP_008449735.1
pre-mRNA-splicing factor CWC22 homolog isoform X1 (847 aa)
     
 
  0.987
XP_008456689.1
116 kDa U5 small nuclear ribonucleoprotein component-like (988 aa)
   
 
  0.986
XP_008453258.1
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (1053 aa)
     
 
  0.984
XP_008461619.1
Splicing factor 3B subunit 3-like (1214 aa)
     
 
  0.981
XP_008443005.1
pre-mRNA-splicing factor RSE1 isoform X1 (1376 aa)
     
 
  0.981
XP_008446924.1
Intron-binding protein aquarius; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (1568 aa)
     
 
  0.980
XP_008459779.1
Protein STABILIZED1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 mRNAs, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (1023 aa)
     
 
  0.977
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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