STRINGSTRING
XP_008439449.1 protein (Cucumis melo) - STRING interaction network
"XP_008439449.1" - Haloacid dehalogenase-like hydrolase domain-containing protein 3 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439449.1Haloacid dehalogenase-like hydrolase domain-containing protein 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (118 aa)    
Predicted Functional Partners:
XP_008457464.1
Uncharacterized protein C24B11.05-like isoform X1; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (555 aa)
           
  0.690
XP_008452027.1
Sugar phosphatase YfbT; Uncharacterized protein LOC103493158 (375 aa)
     
 
  0.654
XP_008445042.1
Two-on-two hemoglobin-3 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns (203 aa)
     
   
  0.628
XP_008452477.1
Stem-specific protein TSJT1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (284 aa)
     
   
  0.590
XP_008459498.1
22.0 kDa class IV heat shock protein; Belongs to the small heat shock protein (HSP20) family (189 aa)
     
   
  0.573
XP_008443425.1
Plant cysteine oxidase 2; 2-aminoethanethiol dioxygenase (288 aa)
     
   
  0.568
XP_008446226.1
Serine/arginine-rich splicing factor RSZ21 (187 aa)
           
  0.567
XP_008438907.1
Probable acyl-CoA dehydrogenase IBR3 isoform X1; acyl-CoA dehydrogenase family member 10 (830 aa)
   
   
  0.527
XP_008465669.1
Deoxyhypusine synthase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (372 aa)
           
  0.487
XP_008463304.1
Deoxyhypusine synthase-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (372 aa)
           
  0.487
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (8%) [HD]