STRINGSTRING
XP_008439455.1 protein (Cucumis melo) - STRING interaction network
"XP_008439455.1" - DNA polymerase eta in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439455.1DNA polymerase eta; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (726 aa)    
Predicted Functional Partners:
XP_008442857.1
DNA repair protein REV1-like isoform X1 (154 aa)
     
 
  0.974
XP_008464069.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (266 aa)
     
 
  0.953
XP_008463200.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (351 aa)
     
 
  0.953
XP_008454411.1
DNA polymerase zeta catalytic subunit-like isoform X1 (709 aa)
     
 
  0.900
XP_008454400.1
LOW QUALITY PROTEIN- DNA polymerase zeta catalytic subunit-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (2094 aa)
     
 
  0.900
XP_008437020.1
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3’-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (1175 aa)
     
 
0.894
XP_008456336.1
DNA polymerase zeta processivity subunit isoform X1 (207 aa)
       
 
  0.879
XP_008465894.1
LOW QUALITY PROTEIN- DNA repair endonuclease UVH1; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1020 aa)
     
 
  0.866
XP_008449833.1
Structural maintenance of chromosomes protein 3 isoform X1 (1203 aa)
   
 
  0.862
XP_008463751.1
Uncharacterized protein LOC103501820; HIV Tat-specific factor 1 homolog (519 aa)
       
 
  0.859
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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