STRINGSTRING
XP_008439462.1 protein (Cucumis melo) - STRING interaction network
"XP_008439462.1" - MADS-box protein FBP24 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439462.1MADS-box protein FBP24 isoform X1 (299 aa)    
Predicted Functional Partners:
XP_008449489.1
FRIGIDA-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns; Belongs to the Frigida family (680 aa)
           
  0.627
XP_008442623.1
WRKY transcription factor 44 isoform X1 (482 aa)
           
  0.597
XP_008453856.1
Polycomb group protein EMBRYONIC FLOWER 2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (639 aa)
           
  0.570
XP_008448794.1
Polycomb group protein EMBRYONIC FLOWER 2 (433 aa)
           
  0.570
XP_008455615.1
Protein TRANSPARENT TESTA GLABRA 1 (333 aa)
           
  0.562
XP_008465606.1
Protein SENSITIVITY TO RED LIGHT REDUCED 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (277 aa)
           
  0.555
XP_008436967.1
Uncharacterized protein LOC103482539 isoform X1 (542 aa)
           
  0.555
XP_008439490.1
Protein SUPPRESSOR OF FRI 4 isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (390 aa)
       
 
  0.502
XP_008462415.1
LOW QUALITY PROTEIN- protein PAF1 homolog; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (705 aa)
       
 
  0.455
XP_008437131.1
Legumain (495 aa)
       
 
  0.421
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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