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XP_008439473.1 protein (Cucumis melo) - STRING interaction network
"XP_008439473.1" - Urease accessory protein D isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
XP_008439473.1Urease accessory protein D isoform X1 (296 aa)    
Predicted Functional Partners:
XP_008453620.1
Urease accessory protein F; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (213 aa)
 
     
  0.990
XP_008444095.1
Urease accessory protein G (285 aa)
   
     
  0.983
XP_008457618.1
Amidophosphoribosyltransferase, chloroplastic-like (577 aa)
   
 
  0.947
XP_008463211.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (533 aa)
   
 
  0.945
XP_008454828.1
The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (1413 aa)
   
 
  0.940
XP_008444880.1
Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (404 aa)
   
 
  0.932
XP_008441168.1
Phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (641 aa)
   
 
  0.932
XP_008452233.1
Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (533 aa)
   
 
  0.919
XP_008437443.1
Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial (402 aa)
   
 
  0.919
XP_008462305.1
Phosphoribosylglycinamide formyltransferase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (294 aa)
   
 
  0.918
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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