STRINGSTRING
XP_008439476.1 protein (Cucumis melo) - STRING interaction network
"XP_008439476.1" - Uncharacterized protein LOC103484265 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439476.1Uncharacterized protein LOC103484265 (282 aa)    
Predicted Functional Partners:
XP_008458103.1
NAC domain-containing protein 21/22-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (254 aa)
           
  0.555
XP_008447414.1
Protein CUP-SHAPED COTYLEDON 3-like (307 aa)
           
  0.555
XP_008457376.1
3-oxo-Delta(4,5)-steroid 5-beta-reductase isoform X1 (393 aa)
     
   
  0.522
XP_008459893.1
NAC domain-containing protein 18 (257 aa)
           
  0.420
XP_008454032.1
NAC domain-containing protein 83-like; NAC transcription factor 25-like (239 aa)
           
  0.420
XP_008438946.1
Uncharacterized protein C167.05 (164 aa)
           
  0.418
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (9%) [HD]