STRINGSTRING
XP_008439477.1 protein (Cucumis melo) - STRING interaction network
"XP_008439477.1" - Glycine-rich RNA-binding protein 4, mitochondrial-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439477.1Glycine-rich RNA-binding protein 4, mitochondrial-like (176 aa)    
Predicted Functional Partners:
XP_008457970.1
Pentatricopeptide repeat-containing protein At5g48910 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (659 aa)
       
 
  0.859
XP_008444078.1
60S ribosomal protein L18a; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 9 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns; Belongs to the eukaryotic ribosomal protein eL20 family (178 aa)
     
 
  0.856
XP_008461174.1
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family (140 aa)
     
 
  0.790
XP_008457630.1
40S ribosomal protein S12-like; Belongs to the eukaryotic ribosomal protein eS12 family (140 aa)
     
 
  0.790
XP_008454611.1
Multiple organellar RNA editing factor 9, chloroplastic; DAG protein, chloroplastic (230 aa)
     
   
  0.753
XP_008439644.1
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family (178 aa)
     
 
  0.617
XP_008456056.1
Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like; Uncharacterized protein At3g15000, mitochondrial-like (213 aa)
           
  0.607
XP_008451724.1
Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; Uncharacterized protein At3g15000, mitochondrial (427 aa)
           
  0.607
XP_008451723.1
Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (472 aa)
           
  0.607
XP_008437005.1
Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (382 aa)
           
  0.607
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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