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XP_008439478.1 protein (Cucumis melo) - STRING interaction network
"XP_008439478.1" - phenylalanine--tRNA ligase, chloroplastic/mitochondrial in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439478.1phenylalanine--tRNA ligase, chloroplastic/mitochondrial (431 aa)    
Predicted Functional Partners:
XP_008453335.1
phenylalanine--tRNA ligase beta subunit, cytoplasmic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 15 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (512 aa)
   
  0.996
XP_008453299.1
Probable phenylalanine--tRNA ligase beta subunit (86 aa)
   
 
  0.983
XP_008449432.1
Ribosome-recycling factor, chloroplastic isoform X1 (278 aa)
 
   
  0.927
XP_008467213.1
valine--tRNA ligase, mitochondrial 1; valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (1045 aa)
   
   
  0.925
XP_008437231.1
Uncharacterized protein LOC103482723 isoform X1 (754 aa)
   
   
  0.905
XP_008449891.1
Probable lysine--tRNA ligase, cytoplasmic isoform X1 (603 aa)
   
   
  0.905
XP_008440038.1
LOW QUALITY PROTEIN- leucine--tRNA ligase, chloroplastic/mitochondrial; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon; Belongs to the class-I aminoacyl-tRNA synthetase family (978 aa)
   
   
  0.897
XP_008457156.1
methionine--tRNA ligase, cytoplasmic; Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (804 aa)
   
   
  0.890
XP_008462105.1
Probable threonine--tRNA ligase, cytoplasmic (672 aa)
   
 
  0.890
XP_008460557.1
threonine--tRNA ligase, mitochondrial (724 aa)
   
 
  0.890
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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