STRINGSTRING
XP_008439481.1 protein (Cucumis melo) - STRING interaction network
"XP_008439481.1" - Thioredoxin O2, mitochondrial-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
XP_008439481.1Thioredoxin O2, mitochondrial-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (198 aa)    
Predicted Functional Partners:
XP_008442136.1
Thioredoxin-like 3-1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (176 aa)
   
     
  0.576
XP_008438984.1
1-Cys peroxiredoxin (219 aa)
   
 
  0.537
XP_008442899.1
2-Cys peroxiredoxin BAS1, chloroplastic-like (274 aa)
   
 
  0.536
XP_008445409.1
Thioredoxin-like protein CITRX, chloroplastic (177 aa)
   
   
  0.515
XP_008460755.1
Thioredoxin reductase NTRC; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (525 aa)
   
 
  0.515
XP_008440977.1
5’-adenylylsulfate reductase 1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 9 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (465 aa)
     
 
  0.488
XP_008440009.1
5’-adenylylsulfate reductase 1, chloroplastic-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 17 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (464 aa)
     
 
  0.488
XP_008453203.1
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (638 aa)
     
 
  0.476
XP_008459018.1
Sulfiredoxin; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (181 aa)
     
 
  0.474
XP_008448444.1
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 10 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (389 aa)
   
 
  0.450
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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