STRINGSTRING
XP_008439501.1 protein (Cucumis melo) - STRING interaction network
"XP_008439501.1" - Vacuolar protein sorting-associated protein 2 homolog 2 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XP_008439501.1Vacuolar protein sorting-associated protein 2 homolog 2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns; Belongs to the SNF7 family (218 aa)    
Predicted Functional Partners:
XP_008462374.1
ESCRT-related protein CHMP1B; Charged multivesicular body protein 1; Belongs to the SNF7 family (203 aa)
     
  0.976
XP_008447589.1
ESCRT-related protein CHMP1B-like; Charged multivesicular body protein 1-like; Belongs to the SNF7 family (203 aa)
     
  0.976
XP_008459153.1
Vacuolar protein sorting-associated protein 32 homolog 2; Belongs to the SNF7 family (218 aa)
     
 
  0.930
XP_008450809.1
Vacuolar protein sorting-associated protein 32 homolog 2; Belongs to the SNF7 family (220 aa)
     
 
  0.930
XP_008458580.1
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns; Belongs to the AAA ATPase family (433 aa)
     
 
  0.915
XP_008458578.1
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1; Vacuolar protein sorting-associated protein 4B-like isoform X1; Belongs to the AAA ATPase family (526 aa)
     
 
  0.915
XP_008463129.1
Charged multivesicular body protein 5-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns; Belongs to the SNF7 family (132 aa)
     
 
  0.873
XP_008446740.1
Charged multivesicular body protein 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns; Belongs to the SNF7 family (237 aa)
     
 
  0.873
XP_008439898.1
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process (209 aa)
     
 
  0.848
XP_008449127.1
Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5; Vacuolar protein sorting-associated protein VTA1 homolog (428 aa)
     
 
  0.834
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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