STRINGSTRING
XP_008439507.1 protein (Cucumis melo) - STRING interaction network
"XP_008439507.1" - LOW QUALITY PROTEIN: UDP-arabinose 4-epimerase 1-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439507.1LOW QUALITY PROTEIN- UDP-arabinose 4-epimerase 1-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (412 aa)    
Predicted Functional Partners:
USP
UDP-sugar pyrophosphorylase; May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars. Can convert galactose- 1-phosphate into glucose-1-phosphate by carrying out both the Gal- 1-P conversion to UDP-Gal and, following an epimerase step, the subsequent reverse reaction of UDP-Glc to Glc-1-P (716 aa)
   
 
  0.930
XP_008458648.1
UDP-D-apiose/UDP-D-xylose synthase 2 (389 aa)
   
0.913
XP_008454496.1
Cellulose synthase-like protein D5; Belongs to the glycosyltransferase 2 family (536 aa)
   
 
  0.908
XP_008454495.1
Cellulose synthase-like protein D5; Belongs to the glycosyltransferase 2 family (784 aa)
   
 
  0.908
XP_008454309.1
Cellulose synthase-like protein D5; Belongs to the glycosyltransferase 2 family (1169 aa)
   
 
  0.908
XP_008438112.1
Probable galactose-1-phosphate uridyltransferase (344 aa)
   
 
  0.855
XP_008459120.1
UDP-arabinose 4-epimerase 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (417 aa)
   
   
 
0.801
XP_008454336.1
UDP-glucuronic acid decarboxylase 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 12 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (435 aa)
   
0.731
XP_008442593.1
UDP-glucuronic acid decarboxylase 1 (438 aa)
   
0.723
XP_008461666.1
UDP-glucuronic acid decarboxylase 6-like (344 aa)
   
0.722
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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