STRINGSTRING
XP_008439544.1 protein (Cucumis melo) - STRING interaction network
"XP_008439544.1" - Probable receptor-like protein kinase At1g30570 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439544.1Probable receptor-like protein kinase At1g30570; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (848 aa)    
Predicted Functional Partners:
XP_008444474.1
Homeobox protein ATH1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (485 aa)
           
  0.629
XP_008453171.1
Plasma membrane ATPase 3 (959 aa)
       
 
  0.611
XP_008437674.1
ATPase 11, plasma membrane-type (956 aa)
       
 
  0.611
XP_008457926.1
Adenylyl cyclase-associated protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns; Belongs to the CAP family (478 aa)
     
 
  0.604
XP_008450201.1
Cyclase-associated protein 1-like (203 aa)
     
 
  0.604
XP_008447035.1
Cyclase-associated protein 1; Belongs to the CAP family (474 aa)
     
 
  0.604
XP_008441367.1
Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (135 aa)
       
 
  0.599
XP_008458453.1
Protein RALF-like 33 (119 aa)
       
 
  0.597
XP_008454184.1
Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (121 aa)
       
 
  0.597
XP_008451660.1
Rapid alkalinization factor-like (112 aa)
       
 
  0.597
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (4%) [HD]