STRINGSTRING
XP_008439545.1 protein (Cucumis melo) - STRING interaction network
"XP_008439545.1" - 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X1 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439545.12-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X1 (663 aa)    
Predicted Functional Partners:
XP_008446490.1
Protein PHYLLO, chloroplastic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (1733 aa)
   
 
  0.987
XP_008446199.1
1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal; Belongs to the enoyl-CoA hydratase/isomerase family (333 aa)
   
  0.984
XP_008451739.1
NADH kinase isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (347 aa)
           
  0.767
XP_008458352.1
Probable enoyl-CoA hydratase, mitochondrial (264 aa)
   
 
  0.762
XP_008460481.1
acetyl-CoA carboxylase 1-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (2218 aa)
     
   
  0.758
XP_008452187.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X1 (304 aa)
   
   
  0.719
XP_008437050.1
Acyl-coenzyme A oxidase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns; Belongs to the acyl-CoA oxidase family (663 aa)
   
   
  0.711
XP_008438175.1
3-phosphoshikimate 1-carboxyvinyltransferase 2; Belongs to the EPSP synthase family (526 aa)
   
   
  0.699
XP_008455170.1
2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (404 aa)
   
   
  0.695
XP_008455852.1
Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic; Uncharacterized protein LOC103495917 (332 aa)
     
        0.690
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (5%) [HD]