STRINGSTRING
XP_008439550.1 protein (Cucumis melo) - STRING interaction network
"XP_008439550.1" - WPP domain-associated protein in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439550.1WPP domain-associated protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (882 aa)    
Predicted Functional Partners:
XP_008439374.1
DEAD-box ATP-dependent RNA helicase 40-like (603 aa)
           
  0.725
XP_008439373.1
DEAD-box ATP-dependent RNA helicase 40-like (1106 aa)
           
  0.725
XP_008438786.1
DEAD-box ATP-dependent RNA helicase 40-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (515 aa)
           
  0.725
XP_008452611.1
MFP1 attachment factor 1-like (159 aa)
           
  0.698
XP_008444590.1
MFP1 attachment factor 1 (154 aa)
           
  0.698
XP_008441525.1
Histidine decarboxylase isoform X1 (486 aa)
           
  0.563
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (8%) [HD]