STRINGSTRING
XP_008439584.1 protein (Cucumis melo) - STRING interaction network
"XP_008439584.1" - Hydroxyproline O-galactosyltransferase GALT2 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439584.1Hydroxyproline O-galactosyltransferase GALT2; Probable beta-1,3-galactosyltransferase 20 (681 aa)    
Predicted Functional Partners:
XP_008458576.1
Beta-1,6-galactosyltransferase GALT29A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (388 aa)
           
  0.855
XP_008447002.1
Uncharacterized protein LOC103489550 (1595 aa)
           
  0.855
XP_008442560.1
Beta-glucuronosyltransferase GlcAT14C; Xylosyltransferase (418 aa)
           
  0.855
XP_008457572.1
Fasciclin-like arabinogalactan protein 4 (390 aa)
           
  0.846
XP_008444233.1
Arabinosyltransferase XEG113; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (640 aa)
           
  0.836
XP_008445237.1
Hexosyltransferase; Probable beta-1,3-galactosyltransferase 9; Belongs to the glycosyltransferase 31 family (346 aa)
           
  0.800
XP_008443440.1
Beta-glucuronosyltransferase GlcAT14B; Xylosyltransferase 1-like (428 aa)
           
  0.730
LIP1
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (381 aa)
           
  0.705
XP_008451839.1
Galactoside 2-alpha-L-fucosyltransferase-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (554 aa)
       
 
  0.662
XP_008459015.1
Probable arabinosyltransferase ARAD1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (464 aa)
           
  0.629
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (4%) [HD]