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XP_008439619.1 protein (Cucumis melo) - STRING interaction network
"XP_008439619.1" - KH domain-containing protein At4g18375-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439619.1KH domain-containing protein At4g18375-like (625 aa)    
Predicted Functional Partners:
XP_008466462.1
Uncharacterized protein At5g48480 (160 aa)
           
  0.852
XP_008454580.1
Glycine-rich RNA-binding protein 4, mitochondrial (173 aa)
     
 
  0.792
XP_008462228.1
RNA-binding protein with multiple splicing (335 aa)
       
      0.791
XP_008441980.1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (194 aa)
     
   
  0.735
XP_008440306.1
Protein WHI4 (316 aa)
     
 
  0.623
XP_008441525.1
Histidine decarboxylase isoform X1 (486 aa)
           
  0.597
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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