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XP_008439630.1 protein (Cucumis melo) - STRING interaction network
"XP_008439630.1" - Katanin p60 ATPase-containing subunit A-like 2 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XP_008439630.1Katanin p60 ATPase-containing subunit A-like 2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (424 aa)    
Predicted Functional Partners:
XP_008441981.1
Telomerase Cajal body protein 1 isoform X1 (490 aa)
     
   
  0.933
XP_008444069.1
Uncharacterized protein LOC103487507 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (301 aa)
           
  0.933
XP_008445914.1
Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (869 aa)
     
 
  0.922
XP_008442143.1
Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (922 aa)
     
 
  0.922
XP_008444707.1
Deoxyuridine 5’-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns (257 aa)
     
   
  0.860
XP_008443734.1
Uncharacterized protein LOC103487250 isoform X1 (300 aa)
           
  0.855
XP_008439357.1
26S proteasome non-ATPase regulatory subunit 6 homolog (386 aa)
     
 
  0.778
XP_008445378.1
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP (395 aa)
   
   
  0.750
XP_008457710.1
Probable ubiquitin-conjugating enzyme E2 23 isoform X1; Belongs to the ubiquitin-conjugating enzyme family (1164 aa)
     
 
  0.750
XP_008456139.1
Ankyrin-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (458 aa)
   
 
  0.743
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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