STRINGSTRING
XP_008439642.1 protein (Cucumis melo) - STRING interaction network
"XP_008439642.1" - La-related protein 6A in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439642.1La-related protein 6A (394 aa)    
Predicted Functional Partners:
XP_008450386.1
RNA-binding protein 8A-B (197 aa)
     
   
  0.726
XP_008457104.1
Protein-lysine N-methyltransferase LOC103496859; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha (400 aa)
           
  0.711
XP_008467302.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (747 aa)
           
  0.704
XP_008459517.1
30-kDa cleavage and polyadenylation specificity factor 30-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (708 aa)
     
 
  0.614
XP_008445183.1
30-kDa cleavage and polyadenylation specificity factor 30; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (710 aa)
     
 
  0.614
XP_008445361.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (547 aa)
           
  0.614
XP_008463719.1
Cell wall protein RBR3-like isoform X1 (428 aa)
           
  0.611
XP_008451702.1
Uncharacterized protein LOC103492918 (418 aa)
           
  0.611
XP_008462759.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (777 aa)
           
  0.598
XP_008462755.1
Probable RNA methyltransferase At5g51130 (272 aa)
       
 
  0.566
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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