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XP_008439644.1 protein (Cucumis melo) - STRING interaction network
"XP_008439644.1" - 60S ribosomal protein L18a in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439644.160S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family (178 aa)    
Predicted Functional Partners:
XP_008443016.1
60S ribosomal protein L21-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 40 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (164 aa)
   
 
  0.988
XP_008459190.1
60S ribosomal protein L31 (120 aa)
   
 
  0.988
XP_008450816.1
60S ribosomal protein L31; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 62 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns (120 aa)
   
 
  0.988
XP_008462900.1
60S ribosomal protein L9-like (195 aa)
     
 
  0.987
XP_008437538.1
60S ribosomal protein L9; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 21 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns (194 aa)
     
 
  0.987
XP_008463199.1
60S ribosomal protein L35a-1 (112 aa)
     
 
  0.986
XP_008442180.1
60S ribosomal protein L35a-1-like (112 aa)
     
 
  0.986
XP_008452010.1
40S ribosomal protein S10-1-like (182 aa)
     
 
  0.985
XP_008466734.1
40S ribosomal protein S8; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 76 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns; Belongs to the eukaryotic ribosomal protein eS8 family (220 aa)
     
 
  0.984
XP_008451649.1
40S ribosomal protein S8-like; Belongs to the eukaryotic ribosomal protein eS8 family (219 aa)
     
 
  0.984
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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