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XP_008439694.1 protein (Cucumis melo) - STRING interaction network
"XP_008439694.1" - Transcription factor GTE12 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
XP_008439694.1Transcription factor GTE12 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (541 aa)    
Predicted Functional Partners:
XP_008462762.1
Helicase protein MOM1 (2546 aa)
     
 
  0.765
XP_008453710.1
Zinc finger CCCH domain-containing protein 44-like isoform X1 (1259 aa)
     
 
  0.761
XP_008448056.1
Zinc finger CCCH domain-containing protein 19 isoform X1 (1774 aa)
     
 
  0.761
XP_008457436.1
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family (98 aa)
       
 
  0.722
XP_008452231.1
Uncharacterized protein At5g08430 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (753 aa)
     
 
  0.700
XP_008451441.1
SWR1-complex protein 4; DNA methyltransferase 1-associated protein 1 (443 aa)
     
 
  0.663
XP_008452565.1
Uncharacterized protein LOC103493547 isoform X1; Transcription elongation factor B polypeptide 2 isoform X1 (103 aa)
       
      0.650
XP_008438779.1
Chromatin structure-remodeling complex protein SYD isoform X1 (3309 aa)
     
 
  0.612
XP_008458871.1
Transcription initiation factor TFIID subunit 7 (201 aa)
     
 
  0.567
XP_008453672.1
LOW QUALITY PROTEIN- putative DEAD-box ATP-dependent RNA helicase 29; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 2 codons (790 aa)
     
 
  0.563
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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