STRINGSTRING
XP_008439703.1 protein (Cucumis melo) - STRING interaction network
"XP_008439703.1" - Cyclic phosphodiesterase-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439703.1Cyclic phosphodiesterase-like (192 aa)    
Predicted Functional Partners:
XP_008463605.1
Uncharacterized protein LOC103501711 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (1195 aa)
           
  0.961
XP_008463743.1
Polynucleotide 3’-phosphatase ZDP; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (391 aa)
           
  0.813
XP_008463899.1
tRNA-splicing endonuclease subunit Sen2-1 isoform X1 (278 aa)
           
  0.800
XP_008462009.1
AP-1 complex subunit sigma-2; Belongs to the adaptor complexes small subunit family (161 aa)
           
  0.715
XP_008461521.1
Uncharacterized protein LOC103500093 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (1341 aa)
           
  0.615
XP_008461146.1
F-box/LRR-repeat protein 14 (578 aa)
           
  0.572
XP_008451217.1
BTB/POZ domain-containing protein At4g08455 (267 aa)
           
  0.561
XP_008462471.1
Acylphosphatase; Uncharacterized protein LOC103500820; Belongs to the acylphosphatase family (200 aa)
           
  0.552
XP_008444151.1
Acetyltransferase At1g77540 isoform X1 (115 aa)
           
  0.548
XP_008450804.1
AP-4 complex subunit sigma; Belongs to the adaptor complexes small subunit family (143 aa)
           
  0.537
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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