STRINGSTRING
XP_008439706.1 protein (Cucumis melo) - STRING interaction network
"XP_008439706.1" - Seipin-2 in Cucumis melo
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439706.1Seipin-2; Uncharacterized protein LOC103484422 (523 aa)    
Predicted Functional Partners:
XP_008439711.1
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (275 aa)
           
  0.728
XP_008464646.1
Choline-phosphate cytidylyltransferase 2-like (328 aa)
           
  0.693
XP_008448438.1
Diacylglycerol O-acyltransferase 2 (335 aa)
     
   
  0.632
XP_008459487.1
Protein NETWORKED 4A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (522 aa)
           
  0.628
XP_008463451.1
Uncharacterized protein LOC103501618; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (1202 aa)
     
        0.599
XP_008451182.1
Cellulose synthase-like protein D4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (1122 aa)
     
   
  0.590
XP_008438379.1
Cellulose synthase-like protein D1; Belongs to the glycosyltransferase 2 family (1047 aa)
     
   
  0.589
XP_008448424.1
Histone acetyltransferase HAC1 isoform X1 (1695 aa)
           
  0.585
XP_008439352.1
Transcription repressor MYB6; Transcription factor MYB34-like (348 aa)
           
  0.582
XP_008463419.1
1-acyl-sn-glycerol-3-phosphate acyltransferase-like; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (298 aa)
           
  0.568
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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