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XP_008439711.1 protein (Cucumis melo) - STRING interaction network
"XP_008439711.1" - Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439711.1Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (275 aa)    
Predicted Functional Partners:
XP_008449444.1
Uncharacterized protein LOC103491329; GRIP and coiled-coil domain-containing protein C27D7.02c (333 aa)
     
        0.866
XP_008438886.1
Uncharacterized protein LOC103483845; Protein FAM179B (293 aa)
     
        0.866
XP_008440837.1
Uncharacterized protein LOC103485142 isoform X1 (504 aa)
     
        0.865
XP_008448552.1
YTH domain-containing protein 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (373 aa)
     
        0.864
XP_008438379.1
Cellulose synthase-like protein D1; Belongs to the glycosyltransferase 2 family (1047 aa)
           
  0.853
XP_008442020.1
Syntaxin-124; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns; Belongs to the syntaxin family (303 aa)
     
        0.845
XP_008441971.1
Syntaxin-related protein KNOLLE; Belongs to the syntaxin family (309 aa)
     
        0.845
XP_008451182.1
Cellulose synthase-like protein D4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (1122 aa)
           
  0.836
XP_008446088.1
Mitotic spindle checkpoint protein MAD2 (208 aa)
     
        0.797
XP_008439706.1
Seipin-2; Uncharacterized protein LOC103484422 (523 aa)
           
  0.728
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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