STRINGSTRING
XP_008439714.1 protein (Cucumis melo) - STRING interaction network
"XP_008439714.1" - Transcription repressor OFP5 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
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Textmining
[Homology]
Score
XP_008439714.1Transcription repressor OFP5; Uncharacterized protein LOC103484429 (468 aa)    
Predicted Functional Partners:
XP_008462151.1
Transcription repressor OFP14; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (298 aa)
           
  0.856
XP_008437194.1
Homeobox protein knotted-1-like 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 12 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (300 aa)
       
 
  0.830
XP_008465302.1
Transcription repressor OFP17; Uncharacterized protein LOC103502957 (189 aa)
           
  0.821
XP_008438676.1
Transcription repressor OFP12-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (205 aa)
           
  0.702
XP_008460982.1
BEL1-like homeodomain protein 7 (675 aa)
       
 
  0.648
XP_008449596.1
BEL1-like homeodomain protein 1 (693 aa)
       
 
  0.648
XP_008442920.1
BEL1-like homeodomain protein 1 (713 aa)
       
 
  0.648
XP_008453416.1
Homeobox protein knotted-1-like 1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (321 aa)
       
 
  0.646
XP_008452885.1
Homeobox protein knotted-1-like 3 isoform X1 (470 aa)
     
 
  0.611
XP_008445246.1
LOW QUALITY PROTEIN- homeobox protein knotted-1-like 3; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (451 aa)
     
 
  0.611
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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