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XP_008439715.1 protein (Cucumis melo) - STRING interaction network
"XP_008439715.1" - LOW QUALITY PROTEIN: protein STICHEL-like 3 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439715.1LOW QUALITY PROTEIN- protein STICHEL-like 3; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 2 codons (1180 aa)    
Predicted Functional Partners:
XP_008448956.1
Replication factor C subunit 2 isoform X1 (331 aa)
     
 
  0.990
XP_008464069.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (266 aa)
   
 
  0.984
XP_008463200.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (351 aa)
   
 
  0.984
XP_008466735.1
Replication factor C subunit 5 (363 aa)
     
 
0.982
XP_008438251.1
Sister chromatid cohesion protein DCC1 (393 aa)
     
 
  0.980
XP_008442036.1
Replication factor C subunit 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (354 aa)
     
 
  0.976
XP_008440733.1
Uncharacterized protein LOC103485060 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (734 aa)
     
 
  0.976
XP_008438224.1
Replication factor C subunit 3-like (618 aa)
     
 
  0.976
XP_008439647.1
DNA replication licensing factor MCM3; Belongs to the MCM family (773 aa)
   
 
  0.970
XP_008451483.1
DNA replication licensing factor MCM7; Belongs to the MCM family (724 aa)
   
 
  0.961
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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