STRINGSTRING
XP_008439716.1 protein (Cucumis melo) - STRING interaction network
"XP_008439716.1" - ER lumen protein-retaining receptor A in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439716.1ER lumen protein-retaining receptor A (215 aa)    
Predicted Functional Partners:
XP_008462127.1
Transmembrane emp24 domain-containing protein p24beta2; Belongs to the EMP24/GP25L family (173 aa)
     
   
  0.937
XP_008465758.1
Transmembrane emp24 domain-containing protein p24delta9-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (230 aa)
     
 
  0.679
XP_008459344.1
Transmembrane emp24 domain-containing protein p24delta9 (214 aa)
     
 
  0.679
XP_008456081.1
Transmembrane emp24 domain-containing protein p24delta3-like (212 aa)
     
 
  0.679
XP_008449419.1
Transmembrane emp24 domain-containing protein p24delta3-like (140 aa)
     
 
  0.679
XP_008460948.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (193 aa)
     
   
  0.655
XP_008444725.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (194 aa)
     
   
  0.655
XP_008463224.1
Syntaxin-31; Belongs to the syntaxin family (338 aa)
     
 
  0.624
XP_008439963.1
Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B (344 aa)
     
      0.613
XP_008439302.1
dnaJ protein ERDJ2A; Translocation protein SEC63 homolog (684 aa)
     
 
  0.593
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (7%) [HD]