STRINGSTRING
XP_008439728.1 protein (Cucumis melo) - STRING interaction network
"XP_008439728.1" - Probable LRR receptor-like serine/threonine-protein kinase At5g45780 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439728.1Probable LRR receptor-like serine/threonine-protein kinase At5g45780 (616 aa)    
Predicted Functional Partners:
XP_008448941.1
Copper chaperone for superoxide dismutase, chloroplastic/cytosolic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (328 aa)
           
  0.810
XP_008459255.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (435 aa)
           
  0.724
XP_008463324.1
Protein SCARECROW 1; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; deleted 4 bases in 3 codons; substituted 1 base at 1 genomic stop codon; Belongs to the GRAS family (857 aa)
           
  0.628
XP_008460030.1
Protein SHORT-ROOT-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns; Belongs to the GRAS family (461 aa)
           
  0.576
XP_008457838.1
Protein SHORT-ROOT-like; Belongs to the GRAS family (502 aa)
           
  0.576
XP_008440387.1
Protein SHORT-ROOT; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the GRAS family (490 aa)
           
  0.576
XP_008450655.1
Isoaspartyl peptidase/L-asparaginase 1 isoform X1 (327 aa)
           
  0.568
XP_008450926.1
Thiol protease aleurain-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns; Belongs to the peptidase C1 family (356 aa)
           
  0.556
XP_008448772.1
Uncharacterized protein LOC103490837 (343 aa)
           
  0.556
XP_008438312.1
Uncharacterized protein LOC103483456 (333 aa)
           
  0.556
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (10%) [HD]