STRINGSTRING
XP_008439737.1 protein (Cucumis melo) - STRING interaction network
"XP_008439737.1" - Transcription factor stalky-like isoform X1 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439737.1Transcription factor stalky-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (345 aa)    
Predicted Functional Partners:
XP_008466719.1
Protein SLOW GREEN 1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (343 aa)
           
  0.514
XP_008463258.1
Serine/threonine-protein kinase PBS1; Belongs to the protein kinase superfamily (400 aa)
           
  0.514
XP_008457150.1
Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (438 aa)
           
  0.514
XP_008454013.1
Nuclear transport factor 2-like (123 aa)
           
  0.514
XP_008459965.1
Uncharacterized protein LOC103498923; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (354 aa)
           
  0.512
XP_008465271.1
LRR repeats and ubiquitin-like domain-containing protein At2g30105 (378 aa)
           
  0.502
XP_008450053.1
Transcription repressor MYB6; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (295 aa)
     
   
  0.437
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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