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XP_008439741.1 protein (Cucumis melo) - STRING interaction network
"XP_008439741.1" - Peroxisome biogenesis protein 7 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439741.1Peroxisome biogenesis protein 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (316 aa)    
Predicted Functional Partners:
XP_008448966.1
Peroxisome biogenesis protein 5 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (743 aa)
     
  0.999
XP_008452775.1
Peroxisome biogenesis factor 10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (393 aa)
     
   
  0.994
XP_008441822.1
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
   
  0.983
XP_008447525.1
Peroxisome biogenesis protein 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (360 aa)
     
   
  0.972
XP_008464561.1
Peroxisomal membrane protein PEX14 isoform X1 (523 aa)
       
 
  0.972
XP_008451618.1
Peroxisome biogenesis protein 6 (939 aa)
     
   
  0.969
XP_008454097.1
LOW QUALITY PROTEIN- peroxisomal membrane protein 13; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (296 aa)
     
 
  0.968
XP_008453453.1
Peroxisome biogenesis protein 3-2 (373 aa)
     
   
  0.902
XP_008455616.1
ABC transporter D family member 1 (1326 aa)
     
   
  0.876
XP_008448848.1
Peroxisome biogenesis protein 19-1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (242 aa)
     
   
  0.866
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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