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XP_008439748.1 protein (Cucumis melo) - STRING interaction network
"XP_008439748.1" - 50S ribosomal protein L34, chloroplastic in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439748.150S ribosomal protein L34, chloroplastic (155 aa)    
Predicted Functional Partners:
XP_008466625.1
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family (204 aa)
     
      0.973
XP_008466097.1
50S ribosomal protein 6, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (106 aa)
     
      0.973
XP_008464053.1
50S ribosomal protein L4, chloroplastic isoform X1 (297 aa)
     
      0.973
XP_008463780.1
50S ribosomal protein L13, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns; Belongs to the universal ribosomal protein uL13 family (248 aa)
     
      0.973
XP_008463697.1
30S ribosomal protein S20, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (184 aa)
     
      0.973
XP_008463369.1
50S ribosomal protein L9, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (198 aa)
     
      0.973
XP_008462962.1
30S ribosomal protein S10, chloroplastic (269 aa)
     
      0.973
XP_008462167.1
30S ribosomal protein S17, chloroplastic; Belongs to the universal ribosomal protein uS17 family (164 aa)
     
      0.973
XP_008461961.1
50S ribosomal protein L21, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (208 aa)
     
      0.973
XP_008461583.1
30S ribosomal protein 3, chloroplastic-like (192 aa)
     
      0.973
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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