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PDC2 protein (Cucumis melo) - STRING interaction network
"PDC2" - Pyruvate decarboxylase 1-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDC2Pyruvate decarboxylase 1-like; Belongs to the TPP enzyme family (590 aa)    
Predicted Functional Partners:
XP_008437100.1
L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns; Belongs to the LDH/MDH superfamily (432 aa)
     
 
  0.952
XP_008466644.1
Pyruvate kinase isozyme G, chloroplastic; Belongs to the pyruvate kinase family (514 aa)
     
 
  0.871
XP_008449299.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns; Belongs to the pyruvate kinase family (589 aa)
     
 
  0.871
XP_008439317.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns; Belongs to the pyruvate kinase family (573 aa)
     
 
  0.871
XP_008454424.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns; Belongs to the pyruvate kinase family (582 aa)
     
 
  0.865
XP_008449903.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns; Belongs to the pyruvate kinase family (500 aa)
     
 
  0.865
XP_008456534.1
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase isoform X1; Belongs to the aldehyde dehydrogenase family (509 aa)
     
  0.847
XP_008453718.1
Aldehyde dehydrogenase family 3 member F1; Belongs to the aldehyde dehydrogenase family (477 aa)
     
  0.816
XP_008449722.1
Aldehyde dehydrogenase family 3 member F1-like; Belongs to the aldehyde dehydrogenase family (481 aa)
     
  0.816
XP_008444182.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns; Belongs to the aldehyde dehydrogenase family (488 aa)
     
  0.816
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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