STRINGSTRING
XP_008439783.1 protein (Cucumis melo) - STRING interaction network
"XP_008439783.1" - GDSL esterase/lipase At5g45950 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439783.1GDSL esterase/lipase At5g45950; Belongs to the ’GDSL’ lipolytic enzyme family (375 aa)    
Predicted Functional Partners:
XP_008441698.1
Cytochrome P450 704B1 (556 aa)
     
        0.864
XP_008466095.1
Uncharacterized protein LOC103503621 (444 aa)
           
  0.728
XP_008460086.1
Uncharacterized protein LOC103499002; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (428 aa)
           
  0.728
XP_008445316.1
Thioredoxin-like protein CDSP32, chloroplastic (299 aa)
     
   
  0.619
XP_008448188.1
Protein EXORDIUM-like 5; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (353 aa)
           
  0.588
XP_008447837.1
Protein EXORDIUM-like 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (338 aa)
           
  0.588
XP_008439107.1
Uncharacterized protein LOC103483997 (345 aa)
           
  0.588
XP_008445322.1
Uncharacterized protein LOC103488388 (425 aa)
           
  0.564
XP_008459361.1
Cyclic nucleotide-gated ion channel 2 (688 aa)
     
   
  0.488
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (15%) [HD]