STRINGSTRING
XP_008439789.1 protein (Cucumis melo) - STRING interaction network
"XP_008439789.1" - WUSCHEL-related homeobox 9-like isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439789.1WUSCHEL-related homeobox 9-like isoform X1 (373 aa)    
Predicted Functional Partners:
XP_008440352.1
LOW QUALITY PROTEIN- protein UNUSUAL FLORAL ORGANS-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (460 aa)
           
  0.810
XP_008464361.1
Floricaula/leafy homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (385 aa)
           
  0.747
XP_008448521.1
Protein FD (211 aa)
           
  0.737
XP_008444930.1
MADS-box protein SVP isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (230 aa)
           
  0.737
XP_008446344.1
Protein FEZ (392 aa)
           
  0.630
XP_008441931.1
Protein FEZ-like (315 aa)
           
  0.630
XP_008455140.1
MADS-box protein SVP-like isoform X1 (222 aa)
           
  0.616
XP_008454463.1
MADS-box protein JOINTLESS-like isoform X1 (223 aa)
           
  0.616
XP_008440538.1
MADS-box protein SVP-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (228 aa)
           
  0.616
XP_008439887.1
Dof zinc finger protein DOF1.4-like (260 aa)
           
  0.611
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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