STRINGSTRING
XP_008439797.1 protein (Cucumis melo) - STRING interaction network
"XP_008439797.1" - OPA3-like protein in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439797.1OPA3-like protein (169 aa)    
Predicted Functional Partners:
XP_008457125.1
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (424 aa)
     
   
  0.653
XP_008444196.1
LOW QUALITY PROTEIN- replication factor C subunit 4; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (336 aa)
           
  0.629
XP_008449500.1
Uncharacterized protein LOC103491368; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns; Belongs to the small heat shock protein (HSP20) family (246 aa)
           
  0.628
XP_008458980.1
EH domain-containing protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (545 aa)
           
  0.596
XP_008467263.1
CDGSH iron-sulfur domain-containing protein NEET (108 aa)
       
 
  0.566
XP_008451995.1
Uncharacterized protein LOC103493134 (832 aa)
     
 
  0.547
XP_008437548.1
Uncharacterized protein LOC103482929 (867 aa)
     
 
  0.547
XP_008462747.1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1171 aa)
           
  0.503
XP_008457112.1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (401 aa)
           
  0.503
XP_008452073.1
Small nuclear ribonucleoprotein Sm D2-like (107 aa)
           
  0.503
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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