STRINGSTRING
XP_008439820.1 protein (Cucumis melo) - STRING interaction network
"XP_008439820.1" - Protein FRIGIDA-ESSENTIAL 1 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008439820.1Protein FRIGIDA-ESSENTIAL 1 isoform X1 (739 aa)    
Predicted Functional Partners:
XP_008449489.1
FRIGIDA-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns; Belongs to the Frigida family (680 aa)
       
 
  0.871
XP_008439490.1
Protein SUPPRESSOR OF FRI 4 isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (390 aa)
           
  0.854
XP_008457316.1
Protein FLC EXPRESSOR (305 aa)
       
 
  0.852
XP_008452385.1
Protein FLX-like 4 (310 aa)
           
  0.836
XP_008462976.1
FRIGIDA-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns; Belongs to the Frigida family (576 aa)
           
  0.728
XP_008450391.1
Zinc finger CCCH domain-containing protein 46-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (657 aa)
           
  0.726
XP_008453710.1
Zinc finger CCCH domain-containing protein 44-like isoform X1 (1259 aa)
           
  0.723
XP_008437663.1
Two-component response regulator-like PRR95 (696 aa)
           
  0.703
XP_008447246.1
Two-component response regulator-like APRR7 (791 aa)
           
  0.699
XP_008440808.1
Transcription initiation factor TFIID subunit 14b isoform X1 (297 aa)
       
 
  0.634
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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