STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanASialidase A (neuraminidase A); LPXTG motif. (1907 aa)    
Predicted Functional Partners:
bgaC
Beta-galactosidase 3; Belongs to the glycosyl hydrolase 35 family.
 
 0.935
zmpB
Zinc metalloprotease; LPXTG motif.
  
   
 0.806
smi_0345
endo-beta-N-acetylglucosaminidase D; LPXTG motif.
  
     0.742
smi_1306
Surface anchored protein; LPXTG motif.
  
     0.701
smi_2019
Fucosidase; COG3669, alpha-L-fucosidase.
 
   
 0.690
bgaA
Beta-galactosidase; LPXTG motif.
 
   
 0.627
smi_1350
Conserved hypothetical protein.
  
    0.622
smi_0797
Oxidoreductase, GFO/IDH/MOCA family; Pfam01408, GFO_IDH_MocA, oxidoreductase family; COG0673, MviM, predicted dehydrogenases and related proteins.
 
   
 0.598
pavA
Adherence and virulence protein A.
      
 0.597
licB
Choline transport protein.
  
     0.597
Your Current Organism:
Streptococcus mitis
NCBI taxonomy Id: 365659
Other names: S. mitis B6, Streptococcus mitis B6, Streptococcus mitis str. B6, Streptococcus mitis strain B6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.