STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_1G000580Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (839 aa)    
Predicted Functional Partners:
Csa_7G214200
Prohibitin.
      
 0.669
Csa_1G004910
Prohibitin.
      
 0.669
Csa_6G186380
Cell division control protein; Belongs to the CDC6/cdc18 family.
      
 0.545
Csa_7G336510
TF-B3 domain-containing protein.
  
   
 0.544
Csa_5G352090
TCP domain-containing protein.
  
     0.501
Csa_5G175170
TCP domain-containing protein.
  
     0.488
Csa_1G032410
NAC domain-containing protein.
  
     0.487
Csa_4G664560
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.456
Csa_3G298060
Uncharacterized protein.
  
     0.453
Csa_5G605000
TCP domain-containing protein.
  
     0.447
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.