STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G194380SANT domain-containing protein. (447 aa)    
Predicted Functional Partners:
Csa_2G070920
LOB domain-containing protein.
      
 0.750
Csa_3G264750
Uncharacterized protein.
      
 0.748
Csa_6G518210
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
    
 0.676
Csa_5G583360
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
    
 0.674
Csa_2G375750
Flavin-containing monooxygenase.
      
 0.669
Csa_1G242600
Flavin-containing monooxygenase.
      
 0.669
Csa_4G430820
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.668
CS-PIN1
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.668
Csa_7G067350
Cystatin domain-containing protein.
      
 0.667
Csa_2G379350
Uncharacterized protein.
      
 0.667
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.