STRINGSTRING
XP_004156066.1 protein (Cucumis sativus) - STRING interaction network
"XP_004156066.1" - Uncharacterized protein in Cucumis sativus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_004156066.1Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 26 ESTs, 2 Proteins (698 aa)    
Predicted Functional Partners:
XP_004163359.1
Uncharacterized protein LOC101232237 (441 aa)
       
 
  0.729
XP_004149156.1
Uncharacterized protein; Upstream in-frame stop codon (301 aa)
       
 
  0.704
XP_004159970.1
Homeobox protein knotted-1-like 7-like (301 aa)
       
 
0.605
XP_004143939.1
Homeobox protein knotted-1-like 7-like (301 aa)
       
 
0.605
ERAF17
Uncharacterized protein; MADS-box transcription factor 6-like (203 aa)
       
 
  0.595
XP_004145150.1
MADS-box transcription factor 6-like (203 aa)
       
 
  0.595
XP_004171808.1
The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred complete CDS- inserted 1 base in 1 codon (397 aa)
       
 
0.585
XP_004170383.1
Homeobox protein knotted-1-like 2-like (369 aa)
       
 
0.582
XP_004155194.1
E3 ubiquitin-protein ligase BRE1-like 1-like (878 aa)
     
      0.568
XP_004167214.1
Uncharacterized LOC101206865 (437 aa)
       
      0.568
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus, Cucumis sativus L., cucumber, cucumbers
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