STRINGSTRING
XP_004170782.1 protein (Cucumis sativus) - STRING interaction network
"XP_004170782.1" - Squamosa promoter-binding-like protein 16-like in Cucumis sativus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_004170782.1Squamosa promoter-binding-like protein 16-like (328 aa)    
Predicted Functional Partners:
XP_004166397.1
Uncharacterized protein; Ethylene-responsive transcription factor RAP2-7-like (456 aa)
           
  0.612
XP_004164686.1
Uncharacterized protein; Ethylene-responsive transcription factor RAP2-7-like (497 aa)
           
  0.612
XP_004148250.1
Ethylene-responsive transcription factor RAP2-7-like (497 aa)
           
  0.612
XP_004146591.1
Serine carboxypeptidase-like 31-like; Belongs to the peptidase S10 family (485 aa)
           
  0.555
XP_004158851.1
Ankyrin repeat domain-containing protein, chloroplastic-like (431 aa)
           
  0.529
XP_004146097.1
Uncharacterized protein ycf45-like (644 aa)
           
  0.526
XP_004150776.1
NAC domain-containing protein 21/22-like (325 aa)
           
  0.508
XP_004144091.1
Uncharacterized protein; Upstream in-frame stop codon; Belongs to the short-chain dehydrogenases/reductases (SDR) family (305 aa)
           
  0.487
XP_004162905.1
Beta-galactosidase 13-like (766 aa)
           
  0.451
XP_004156783.1
Uncharacterized protein; Upstream in-frame stop codon (336 aa)
           
  0.446
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus, Cucumis sativus L., cucumber, cucumbers
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