STRINGSTRING
dbp10 protein (Neosartorya fischeri) - STRING interaction network
"dbp10" - ATP-dependent RNA helicase dbp10 in Neosartorya fischeri
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dbp10ATP-dependent RNA helicase dbp10; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily (934 aa)    
Predicted Functional Partners:
CADNFIAP00003514
Nucleolar RNA methyltransferase (Nop2), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (750 aa)
     
 
  0.994
CADNFIAP00007779
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (655 aa)
     
 
  0.993
CADNFIAP00009259
Ribosomal biogenesis protein Gar2 (477 aa)
     
 
  0.992
CADNFIAP00005160
DEAH-box RNA helicase (Dhr1), putative (1210 aa)
     
 
  0.992
CADNFIAP00008764
Ribosome biogenesis protein, putative (330 aa)
     
 
  0.991
CADNFIAP00001358
GTP-binding protein (557 aa)
     
 
  0.990
drs1
ATP-dependent RNA helicase drs1; ATP-binding RNA helicase involved in ribosome assembly (819 aa)
   
0.990
CADNFIAP00008589
RRNA maturation protein (Nop14), putative (914 aa)
     
 
  0.989
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (794 aa)
     
 
  0.987
CADNFIAP00001180
Ribosome assembly protein Noc2, putative (789 aa)
     
 
  0.987
Your Current Organism:
Neosartorya fischeri
NCBI taxonomy Id: 36630
Other names: Aspergillus fischeri, Aspergillus fischerianus, N. fischeri, Neosartorya fischeri
Server load: low (11%) [HD]