STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1427Mandelate racemase/muconate lactonizing protein; Catalyzes the dehydration of D-mannonate. Has no detectable activity with a panel of 70 other acid sugars (in vitro). (403 aa)    
Predicted Functional Partners:
Caul_1753
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ccr:CC_1487 mannitol 2-dehydrogenase.
 
  
 0.974
Caul_1545
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: nar:Saro_2430 altronate dehydratase.
    
 0.908
Caul_1754
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: ccr:CC_1488 altronate hydrolase.
    
 0.908
Caul_1758
TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ccr:CC_1492 2-deoxy-D-gluconate 3-dehydrogenase.
    
 0.901
Caul_2722
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:blr5973 2-deoxy-D-gluconate 3-dehydrogenase.
    
 0.901
Caul_3063
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ccr:CC_1571 gluconate 5-dehydrogenase.
    
 0.901
Caul_4412
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ccr:CC_3380 2-deoxy-D-gluconate 3-dehydrogenase.
    
 0.901
Caul_1835
Mandelate racemase/muconate lactonizing protein; Catalyzes the dehydration of D-mannonate. Has no detectable activity with a panel of 70 other acid sugars (in vitro).
  
  
 
0.900
Caul_1761
PFAM: PfkB domain protein; KEGG: ccr:CC_1496 carbohydrate kinase, pfkB family.
 
  
 0.836
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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