STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_1580PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO3719 putative glutathione S-transferase enzyme with thioredoxin-like domain; Belongs to the GST superfamily. (234 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.580
Caul_3515
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
     0.546
Caul_1579
Hypothetical protein.
       0.532
Caul_0203
KEGG: ccr:CC_0128 hypothetical protein.
   
 0.514
Caul_1576
PFAM: Mammalian cell entry related domain protein; KEGG: ccr:CC_3694 putative ABC transport system substrate-bindin protein.
       0.477
Caul_1577
PFAM: protein of unknown function DUF140; KEGG: ccr:CC_3695 putative ABC transport system permease protein.
       0.477
Caul_1578
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccr:CC_3696 putative ABC transport system ATP-binding protein.
       0.477
Caul_1581
TIGRFAM: methyltransferase; PFAM: protein of unknown function DUF323; KEGG: afw:Anae109_2423 protein of unknown function DUF323.
       0.458
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.444
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   0.443
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.