STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_2011SMART: ParB domain protein nuclease; KEGG: mlo:mlr6157 similar to partitioning protein. (608 aa)    
Predicted Functional Partners:
Caul_2013
PFAM: protein of unknown function DUF736; KEGG: mlo:mlr6185 hypothetical protein.
  
     0.762
Caul_2233
PFAM: protein of unknown function DUF736; KEGG: mlo:mlr6185 hypothetical protein.
  
     0.756
Caul_2009
KEGG: rpc:RPC_3921 antirestriction protein; ArdC.
 
     0.752
Caul_2036
KEGG: pla:Plav_1844 hypothetical protein.
  
     0.745
Caul_2010
KEGG: bbt:BBta_7395 hypothetical protein.
 
     0.727
Caul_2005
PFAM: domain of unknown function DUF1738; KEGG: mlo:mlr6154 antirestriction protein.
 
     0.719
Caul_2014
KEGG: mlo:msr6186 hypothetical protein.
 
     0.641
Caul_2231
KEGG: mes:Meso_0539 domain of unknown function DUF1738.
 
     0.589
Caul_2017
KEGG: pla:Plav_1821 hypothetical protein.
  
     0.567
Caul_2006
PFAM: integrase family protein; KEGG: acr:Acry_3507 phage integrase family protein.
 
  
 0.563
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.