STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_3065PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ccr:CC_1569 NADP-dependent quinone oxidoreductase, putative. (325 aa)    
Predicted Functional Partners:
Caul_3063
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ccr:CC_1571 gluconate 5-dehydrogenase.
  
   0.790
Caul_3064
PFAM: 2-nitropropane dioxygenase NPD; KEGG: ccr:CC_1570 hypothetical protein.
     
 0.785
Caul_3066
PFAM: beta-lactamase; KEGG: ccr:CC_1568 hypothetical protein.
       0.640
Caul_4407
PFAM: aminoglycoside phosphotransferase; KEGG: ccr:CC_1233 hypothetical protein.
 
   0.419
Caul_1346
PFAM: MaoC domain protein dehydratase; KEGG: ccr:CC_0942 MaoC family protein.
 
 0.413
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.