STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caul_4830PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ccr:CC_0096 quinone oxidoreductase. (332 aa)    
Predicted Functional Partners:
Caul_4543
PFAM: aminoglycoside phosphotransferase; KEGG: ccr:CC_0299 hypothetical protein.
 
   0.712
Caul_1346
PFAM: MaoC domain protein dehydratase; KEGG: ccr:CC_0942 MaoC family protein.
 
 0.700
Caul_1885
PFAM: aminoglycoside phosphotransferase; KEGG: pla:Plav_0370 aminoglycoside phosphotransferase.
 
   0.605
Caul_4407
PFAM: aminoglycoside phosphotransferase; KEGG: ccr:CC_1233 hypothetical protein.
 
   0.596
Caul_4071
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ccr:CC_0690 acyl-CoA dehydrogenase family protein.
 
   0.589
Caul_4831
PFAM: peptidase T2 asparaginase 2; KEGG: ccr:CC_0097 asparaginase family protein.
  
    0.581
Caul_2913
PFAM: aminoglycoside phosphotransferase; KEGG: ccr:CC_1435 hypothetical protein.
 
   0.556
Caul_4829
TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ccr:CC_0095 WecB/TagA/CpsF family protein; Belongs to the glycosyltransferase 26 family.
       0.452
Caul_4828
Hypothetical protein.
       0.445
Caul_4827
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ccr:CC_0094 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
  
   0.403
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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